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dbVar

Database of genomic structural variation

nsv9385

Organism: Homo sapiens

Study:nstd4 (Perry et al. 2008)
Variant Type:copy number variation
Method Type:Oligo aCGH
Submitted on:NCBI35 (hg17)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:18,697

Publication(s):Perry et al. 2008

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 70 SVs from 20 studies. See in: genome view

Remapped(Score: Perfect):18,887,835-18,906,531

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Outer Stop
nsv9385	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000016.10	Chr16	18,887,835	18,906,531
nsv9385	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000016.9	Chr16	18,899,157	18,917,853
nsv9385	Submitted genomic		NCBI35 (hg17)	Primary Assembly		NC_000016.8	Chr16	18,806,658	18,825,354

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv22518	copy number loss	NA18564	Oligo aCGH	Probe signal intensity	553

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nssv22518	Remapped	Perfect	NC_000016.10:g.(18 887835_18888308)_( 18906091_18906531) del	GRCh38.p12	First Pass	NC_000016.10	Chr16	18,887,835	18,888,308	18,906,091	18,906,531
nssv22518	Remapped	Perfect	NC_000016.9:g.(188 99157_18899630)_(1 8917413_18917853)d el	GRCh37.p13	First Pass	NC_000016.9	Chr16	18,899,157	18,899,630	18,917,413	18,917,853
nssv22518	Submitted genomic		NC_000016.8:g.(188 06658_18807131)_(1 8824914_18825354)d el	NCBI35 (hg17)		NC_000016.8	Chr16	18,806,658	18,807,131	18,824,914	18,825,354

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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