nsv9401
- Organism: Homo sapiens
- Study:nstd4 (Perry et al. 2008)
- Variant Type:copy number variation
- Method Type:Oligo aCGH
- Submitted on:NCBI35 (hg17)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:25,574
- Publication(s):Perry et al. 2008
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 207 SVs from 24 studies. See in: genome view
Overlapping variant regions from other studies: 83 SVs from 11 studies. See in: genome view
Overlapping variant regions from other studies: 207 SVs from 24 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv9401 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000016.10 | Chr16 | 21,907,223 | 21,932,796 |
| nsv9401 | Remapped | Good | GRCh38.p12 | PATCHES | Second Pass | NW_017852933.1 | Chr16|NW_0 17852933.1 | 1,172,246 | 1,197,815 |
| nsv9401 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000016.9 | Chr16 | 21,918,544 | 21,944,117 |
| nsv9401 | Submitted genomic | NCBI35 (hg17) | Primary Assembly | NC_000016.8 | Chr16 | 21,826,045 | 21,851,618 |
Variant Call Information
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nssv22638 | Remapped | Good | NW_017852933.1:g.( 1172246_1172246)_( 1197815_1197815)de l | GRCh38.p12 | Second Pass | NW_017852933.1 | Chr16|NW_0 17852933.1 | 1,172,246 | 1,172,246 | 1,197,815 | 1,197,815 |
| nssv22638 | Remapped | Perfect | NC_000016.10:g.(21 907223_21907679)_( 21932048_21932796) del | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 21,907,223 | 21,907,679 | 21,932,048 | 21,932,796 |
| nssv22638 | Remapped | Perfect | NC_000016.9:g.(219 18544_21919000)_(2 1943369_21944117)d el | GRCh37.p13 | First Pass | NC_000016.9 | Chr16 | 21,918,544 | 21,919,000 | 21,943,369 | 21,944,117 |
| nssv22638 | Submitted genomic | NC_000016.8:g.(218 26045_21826501)_(2 1850870_21851618)d el | NCBI35 (hg17) | NC_000016.8 | Chr16 | 21,826,045 | 21,826,501 | 21,850,870 | 21,851,618 |