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dbVar

Database of genomic structural variation

nsv9618

Organism: Homo sapiens

Study:nstd4 (Perry et al. 2008)
Variant Type:copy number variation
Method Type:Oligo aCGH
Submitted on:NCBI35 (hg17)

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:33,477

Publication(s):Perry et al. 2008

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 264 SVs from 27 studies. See in: genome view

Remapped(Score: Perfect):14,784,249-14,817,725

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Outer Stop
nsv9618	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000018.10	Chr18	14,784,249	14,817,725
nsv9618	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000018.9	Chr18	14,784,248	14,817,724
nsv9618	Submitted genomic		NCBI35 (hg17)	Primary Assembly		NC_000018.8	Chr18	14,774,248	14,807,724

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv21641	copy number loss	NA12872	Oligo aCGH	Probe signal intensity	470
nssv26592	copy number gain	NA18504	Oligo aCGH	Probe signal intensity	700

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nssv21641	Remapped	Perfect	NC_000018.10:g.(14 784249_14784827)_( 14817201_14817725) del	GRCh38.p12	First Pass	NC_000018.10	Chr18	14,784,249	14,784,827	14,817,201	14,817,725
nssv26592	Remapped	Perfect	NC_000018.10:g.(14 791648_14792441)_( 14814864_14815927) dup	GRCh38.p12	First Pass	NC_000018.10	Chr18	14,791,648	14,792,441	14,814,864	14,815,927
nssv21641	Remapped	Perfect	NC_000018.9:g.(147 84248_14784826)_(1 4817200_14817724)d el	GRCh37.p13	First Pass	NC_000018.9	Chr18	14,784,248	14,784,826	14,817,200	14,817,724
nssv26592	Remapped	Perfect	NC_000018.9:g.(147 91647_14792440)_(1 4814863_14815926)d up	GRCh37.p13	First Pass	NC_000018.9	Chr18	14,791,647	14,792,440	14,814,863	14,815,926
nssv21641	Submitted genomic		NC_000018.8:g.(147 74248_14774826)_(1 4807200_14807724)d el	NCBI35 (hg17)		NC_000018.8	Chr18	14,774,248	14,774,826	14,807,200	14,807,724
nssv26592	Submitted genomic		NC_000018.8:g.(147 81647_14782440)_(1 4804863_14805926)d up	NCBI35 (hg17)		NC_000018.8	Chr18	14,781,647	14,782,440	14,804,863	14,805,926

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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