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natd1 zgc:110779 [ Danio rerio (zebrafish) ]

Gene ID: 100002945, updated on 2-Nov-2024

Summary

Official Symbol
natd1provided by ZNC
Official Full Name
zgc:110779provided by ZNC
Primary source
ZFIN:ZDB-GENE-050306-19
See related
Ensembl:ENSDARG00000038281 AllianceGenome:ZFIN:ZDB-GENE-050306-19
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
gtlf3b; fb83e01; wu:fb83e01
Summary
Orthologous to human NATD1 (N-acetyltransferase domain containing 1). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
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Genomic context

See natd1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 3 NC_007114.7 (15817701..15822078)
105 previous assembly GRCz10 (GCF_000002035.5) 3 NC_007114.6 (15667901..15672278)

Chromosome 3 - NC_007114.7Genomic Context describing neighboring genes Neighboring gene zinc finger protein 652 Neighboring gene phosphoethanolamine/phosphocholine phosphatase 1 Neighboring gene transmembrane protein 11 Neighboring gene dehydrogenase/reductase (SDR family) member 7B

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General protein information

Preferred Names
protein NATD1
Names
N-acetyltransferase domain containing 1
N-acetyltransferase domain-containing protein 1
protein GTLF3B
transcript expressed during hematopoiesis 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001013318.1NP_001013336.1  protein NATD1

    See identical proteins and their annotated locations for NP_001013336.1

    Status: PROVISIONAL

    Source sequence(s)
    BC090291
    UniProtKB/Swiss-Prot
    Q5D014
    Related
    ENSDARP00000055786.5, ENSDART00000055787.6
    Conserved Domains (1) summary
    pfam14542
    Location:26104
    Acetyltransf_CG; GCN5-related N-acetyl-transferase

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007114.7 Reference GRCz11 Primary Assembly

    Range
    15817701..15822078
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)