otulinb OTU deubiquitinase with linear linkage specificity b [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: otulinbprovided by ZNC
Official Full Name: OTU deubiquitinase with linear linkage specificity bprovided by ZNC
Primary source: ZFIN:ZDB-GENE-070912-627
See related: Ensembl:ENSDARG00000079886 AllianceGenome:ZFIN:ZDB-GENE-070912-627
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: fam105bb; wu:fc69a03; si:dkeyp-106c5.3
Summary: Predicted to enable thiol-dependent deubiquitinase. Predicted to be involved in protein linear deubiquitination. Predicted to be active in cytoplasm. Human ortholog(s) of this gene implicated in otulipenia. Orthologous to several human genes including OTULIN (OTU deubiquitinase with linear linkage specificity). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: all
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Genomic context

Location:: chromosome: 2

Exon count:: 10

Annotation release	Status	Assembly	Chr	Location
106	current	GRCz11 (GCF_000002035.6)	2	NC_007113.7 (31942377..31952001)
105	previous assembly	GRCz10 (GCF_000002035.5)	2	NC_007113.6 (31959157..31969085)

Chromosome 2 - NC_007113.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables cysteine-type deubiquitinase activity	IBA Inferred from Biological aspect of Ancestor more info

Process	Evidence Code	Pubs
involved_in protein linear deubiquitination	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
is_active_in cytoplasm	IBA Inferred from Biological aspect of Ancestor more info
located_in cytoplasm	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: OTU deubiquitinase with linear linkage specificity b

Names: family with sequence similarity 105, member B

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.