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LOC100006562 uncharacterized LOC100006562 [ Danio rerio (zebrafish) ]

Gene ID: 100006562, updated on 27-Mar-2024

Summary

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Gene symbol
LOC100006562
Gene description
uncharacterized LOC100006562
See related
Ensembl:ENSDARG00000100090
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Orthologs
all
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Genomic context

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See LOC100006562 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
4
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 4 NC_007115.7 (63490382..63493679)
105 previous assembly GRCz10 (GCF_000002035.5) 4 NC_007115.6 (61916230..61919532)

Chromosome 4 - NC_007115.7Genomic Context describing neighboring genes Neighboring gene protein NLRC3-like Neighboring gene gastrula zinc finger protein XlCGF8.2DB-like Neighboring gene uncharacterized LOC110439601 Neighboring gene transfer RNA arginine (anticodon UCU)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
uncharacterized protein LOC100006562

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007115.7 Reference GRCz11 Primary Assembly

    Range
    63490382..63493679
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021475379.1 → XP_021331054.1  uncharacterized protein LOC100006562

    UniProtKB/TrEMBL
    A0A8M9Q1C4
    Related
    ENSDARP00000133026.1, ENSDART00000169518.2
    Conserved Domains (1) summary
    cl24015
    Location:1 → 31
    DDE_Tnp_ISL3; Transposase
Nucleotide Protein
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