trhde.1 thyrotropin releasing hormone degrading enzyme, tandem duplicate 1 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: trhde.1provided by ZNC
Official Full Name: thyrotropin releasing hormone degrading enzyme, tandem duplicate 1provided by ZNC
Primary source: ZFIN:ZDB-GENE-170406-2
See related: Ensembl:ENSDARG00000109358 AllianceGenome:ZFIN:ZDB-GENE-170406-2
Gene type: protein coding
RefSeq status: MODEL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: PAP-II; trh-de; trhde1-1; si:ch211-149p5.1
Orthologs: all
NEW: Try the new Gene table
Try the new Transcript table

Genomic context

Location:: chromosome: 4

Exon count:: 19

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	4	NC_007115.7 (23223789..23409301)
105	previous assembly	GRCz10 (GCF_000002035.5)	4	NC_007115.6 (23502527..23691113)

Chromosome 4 - NC_007115.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help

See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

Go to the top of the page Help

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

Go to the top of the page Help

Homology

NCBI Orthologs

Orthologs from OrthoDB

General protein information

Go to the top of the page Help

Preferred Names: thyrotropin releasing hormone degrading enzyme, tandem duplicate 1; thyrotropin-releasing hormone-degrading ectoenzyme

Names: TRH-degrading ectoenzyme); pyroglutamyl-peptidase II

XP_001345457.3

EC 3.4.11.-

XP_021329677.1

EC 3.4.11.-

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

NC_007115.7 Reference GRCz11 Primary Assembly

Range

23223789..23409301

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_001345421.8 → XP_001345457.3 thyrotropin-releasing hormone-degrading ectoenzyme isoform X1

UniProtKB/TrEMBL

A0A8M1Q7Z4

Related

ENSDARP00000083559.5, ENSDART00000089126.7

Conserved Domains (3) summary

cd09601
Location:118 → 568

M1_APN_2; Peptidase M1 Aminopeptidase N family incudes tricorn interacting factor F3, Endoplasmic reticulum aminopeptidase 1 (ERAP1), Aminopeptidase Q (APQ)

pfam01433
Location:109 → 500

Peptidase_M1; Peptidase family M1

pfam11838
Location:649 → 968

ERAP1_C; ERAP1-like C-terminal domain

Reference GRCz11 ALT_DRER_TU_2

Genomic

NW_018395231.1 Reference GRCz11 ALT_DRER_TU_2

Range

400834..480940

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_021474002.2 → XP_021329677.1 thyrotropin-releasing hormone-degrading ectoenzyme isoform X2

UniProtKB/TrEMBL

A0A8M9PET6

Conserved Domains (1) summary

cd09601
Location:118 → 415

M1_APN_2; Peptidase M1 Aminopeptidase N family incudes tricorn interacting factor F3, Endoplasmic reticulum aminopeptidase 1 (ERAP1), Aminopeptidase Q (APQ)