zgc:163022 zgc:163022 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: zgc:163022provided by ZNC
Official Full Name: zgc:163022provided by ZNC
Primary source: ZFIN:ZDB-GENE-070424-101
See related: Ensembl:ENSDARG00000061481 AllianceGenome:ZFIN:ZDB-GENE-070424-101
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: frrs1; fj05g07; wu:fj05g07
Summary: Predicted to enable oxidoreductase activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in intestine. Orthologous to human FRRS1 (ferric chelate reductase 1). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: all
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Genomic context

Location:: chromosome: 24

Exon count:: 15

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	24	NC_007135.7 (29758277..29777453, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	24	NC_007135.6 (29769961..29789286, complement)

Chromosome 24 - NC_007135.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables metal ion binding	IEA Inferred from Electronic Annotation more info
enables oxidoreductase activity	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
is_active_in membrane	IBA Inferred from Biological aspect of Ancestor more info
located_in membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: putative ferric-chelate reductase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001089557.2 → NP_001083026.2 putative ferric-chelate reductase 1 precursor

Status: VALIDATED

Source sequence(s)

CABZ01041811, CABZ01041812

UniProtKB/TrEMBL

A0A8M6Z4A6, E7FGT6

Related

ENSDARP00000082157.4, ENSDART00000087724.6

Conserved Domains (3) summary

cd08760
Location:314 → 525

Cyt_b561_FRRS1_like; Eukaryotic cytochrome b(561), including the FRRS1 gene product

cd09628
Location:186 → 343

DOMON_SDR_2_like; DOMON domain of stromal cell-derived receptor 2 (ferric chelate reductase 1) and related proteins

pfam02014
Location:34 → 159

Reeler; Reeler domain