vat1l vesicle amine transport 1-like [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: vat1lprovided by ZNC
Official Full Name: vesicle amine transport 1-likeprovided by ZNC
Primary source: ZFIN:ZDB-GENE-080204-21
See related: Ensembl:ENSDARG00000101280 AllianceGenome:ZFIN:ZDB-GENE-080204-21
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: zgc:171879
Summary: Predicted to enable oxidoreductase activity and zinc ion binding activity. Orthologous to human VAT1L (vesicle amine transport 1 like). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: human mouse all
NEW: Try the new Gene table
Try the new Transcript table

Genomic context

Location:: chromosome: 7

Exon count:: 3

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	7	NC_007118.7 (65309752..65314449)
105	previous assembly	GRCz10 (GCF_000002035.5)	7	NC_007118.6 (65085724..65090421)

Chromosome 7 - NC_007118.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help

See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

Go to the top of the page Help

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

Go to the top of the page Help

Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables oxidoreductase activity	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
is_active_in cellular_component	ND No biological Data available more info

General protein information

Go to the top of the page Help

Preferred Names: synaptic vesicle membrane protein VAT-1 homolog-like

Names: vesicle amine transport protein 1 homolog (T. californica)-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001114560.1 → NP_001108032.1 synaptic vesicle membrane protein VAT-1 homolog-like

See identical proteins and their annotated locations for NP_001108032.1

Status: PROVISIONAL

Source sequence(s)

BC154027

UniProtKB/TrEMBL

A8KBA0

Related

ENSDART00000169632.2

Conserved Domains (2) summary

COG0604
Location:34 → 185

Qor; NADPH:quinone reductase or related Zn-dependent oxidoreductase [Energy production and conversion, General function prediction only]

cl16912
Location:35 → 185

MDR; Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family