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cbln11 cerebellin 11 [ Danio rerio (zebrafish) ]

Gene ID: 100149559, updated on 12-Sep-2024

Summary

Official Symbol
cbln11provided by ZNC
Official Full Name
cerebellin 11provided by ZNC
Primary source
ZFIN:ZDB-GENE-111110-2
See related
Ensembl:ENSDARG00000086654 AllianceGenome:ZFIN:ZDB-GENE-111110-2
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Orthologs
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Genomic context

See cbln11 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 7 NC_007118.7 (4291710..4296700, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 7 NC_007118.6 (4153684..4158674, complement)

Chromosome 7 - NC_007118.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108190601 Neighboring gene kelch-like protein 33 Neighboring gene si:ch211-63p21.8 Neighboring gene solute carrier family 12 member 10, tandem duplicate 2

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General protein information

Preferred Names
cerebellin 11
Names
sghC1q11

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001293704.1NP_001280633.1  cerebellin 11 precursor

    Status: VALIDATED

    Source sequence(s)
    EH488720, EH494747
    UniProtKB/TrEMBL
    A0A8M1P6T4, E7F5I8
    Related
    ENSDARP00000107225.1, ENSDART00000128855.4
    Conserved Domains (1) summary
    pfam00386
    Location:75205
    C1q; C1q domain

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007118.7 Reference GRCz11 Primary Assembly

    Range
    4291710..4296700 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)