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si:dkey-46k9.4 si:dkey-46k9.4 [ Danio rerio (zebrafish) ]

Gene ID: 101885111, updated on 12-Sep-2024

Summary

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Official Symbol
si:dkey-46k9.4provided by ZNC
Official Full Name
si:dkey-46k9.4provided by ZNC
Primary source
ZFIN:ZDB-GENE-081105-82
See related
AllianceGenome:ZFIN:ZDB-GENE-081105-82
Gene type
ncRNA
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
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Genomic context

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See si:dkey-46k9.4 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 9 NC_007120.7 (29506528..29510547, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 9 NC_007120.6 (29695900..29699084, complement)

Chromosome 9 - NC_007120.7Genomic Context describing neighboring genes Neighboring gene DnaJ (Hsp40) homolog, subfamily C, member 3a Neighboring gene uncharacterized LOC137490360 Neighboring gene uncharacterized LOC137490359 Neighboring gene ferredoxin 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007120.7 Reference GRCz11 Primary Assembly

    Range
    29506528..29510547 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_002459512.2 RNA Sequence

  2. XR_002459511.2 RNA Sequence

  3. XR_011016861.1 RNA Sequence

  4. XR_002459513.2 RNA Sequence

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018394759.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    111643..115662 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_002457238.2 RNA Sequence

  2. XR_662618.3 RNA Sequence

  3. XR_011009782.1 RNA Sequence

  4. XR_662621.3 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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