U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

si:ch211-139k8.2 si:ch211-139k8.2 [ Danio rerio (zebrafish) ]

Gene ID: 101886418, updated on 12-Sep-2024

Summary

Go to the top of the page Help
Official Symbol
si:ch211-139k8.2provided by ZNC
Official Full Name
si:ch211-139k8.2provided by ZNC
Primary source
ZFIN:ZDB-LINCRNAG-070912-67
See related
Ensembl:ENSDARG00000091946 AllianceGenome:ZFIN:ZDB-LINCRNAG-070912-67
Gene type
ncRNA
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
si:ch211-139k8.3
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See si:ch211-139k8.2 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 2 NC_007113.7 (32019691..32092184)
105 previous assembly GRCz10 (GCF_000002035.5) 2 NC_007113.6 (32036423..32106895)

Chromosome 2 - NC_007113.7Genomic Context describing neighboring genes Neighboring gene ANKH inorganic pyrophosphate transport regulator b Neighboring gene MYC proto-oncogene, bHLH transcription factor b Neighboring gene uncharacterized LOC100003868 Neighboring gene uncharacterized LOC137487932

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. The Tetraodon nigroviridis reference transcriptome: developmental transition, length retention and microsynteny of long non-coding RNAs in a compact vertebrate genome. Basu S, et al. Sci Rep, 2016 Sep 15. PMID 27628538, Free PMC Article
  2. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007113.7 Reference GRCz11 Primary Assembly

    Range
    32019691..32092184
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_011006753.1 RNA Sequence

  2. XR_223198.5 RNA Sequence

  3. XR_660167.4 RNA Sequence

    Related
    ENSDART00000140776.3
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.