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DMRT1 doublesex and mab-3 related transcription factor 1 [ Chrysemys picta (Painted turtle) ]

Gene ID: 101944829, updated on 8-Mar-2024

Summary

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Gene symbol
DMRT1
Gene description
doublesex and mab-3 related transcription factor 1
See related
Ensembl:ENSCPBG00000025458
Gene type
protein coding
RefSeq status
MODEL
Organism
Chrysemys picta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Chrysemys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 7
Exon count:
5
Annotation release Status Assembly Chr Location
103 current Chrysemys_picta_BioNano-3.0.4 (GCF_000241765.4) 7 NC_024224.2 (30687814..30773981)
102 previous assembly Chrysemys_picta_bellii-3.0.3 (GCF_000241765.3) 6 NC_024223.1 (11237435..11323529)

Chromosome 7 - NC_024224.2Genomic Context describing neighboring genes Neighboring gene dedicator of cytokinesis 8 Neighboring gene uncharacterized LOC122173748 Neighboring gene uncharacterized LOC122173749 Neighboring gene KN motif and ankyrin repeat domains 1 Neighboring gene doublesex and mab-3 related transcription factor 3 Neighboring gene doublesex and mab-3 related transcription factor 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Alternative splicing and thermosensitive expression of Dmrt1 during urogenital development in the painted turtle, Chrysemys picta. Mizoguchi B, et al. PeerJ, 2020. PMID 32219017, Free PMC Article
  2. Multivariate expression analysis of the gene network underlying sexual development in turtle embryos with temperature-dependent and genotypic sex determination. Valenzuela N. Sex Dev, 2010. PMID 20110645

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sex differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
doublesex- and mab-3-related transcription factor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chrysemys picta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Chrysemys_picta_BioNano-3.0.4 Primary Assembly

Genomic

  1. NC_024224.2 Reference Chrysemys_picta_BioNano-3.0.4 Primary Assembly

    Range
    30687814..30773981
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005296762.3 → XP_005296819.1  doublesex- and mab-3-related transcription factor 1

    UniProtKB/TrEMBL
    A0A6H0DVH8, A0A8C3IMD9, A0A8C3IS47
    Related
    ENSCPBP00000036668.1
    Conserved Domains (2) summary
    pfam00751
    Location:60 → 106
    DM; DM DNA binding domain
    pfam12374
    Location:118 → 191
    Dmrt1; Double-sex mab3 related transcription factor 1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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