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LOC110254495 putative ankyrin repeat protein RBE_0997 [ Exaiptasia diaphana ]

Gene ID: 110254495, updated on 23-Nov-2023

Summary

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Gene symbol
LOC110254495
Gene description
putative ankyrin repeat protein RBE_0997
See related
EnsemblRapid:LOC110254495
Gene type
protein coding
RefSeq status
MODEL
Organism
Exaiptasia diaphana
Lineage
Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Aiptasiidae; Exaiptasia
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Genomic context

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See LOC110254495 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_11 current Aiptasia genome 1.1 (GCF_001417965.1) Unplaced Scaffold NW_018388410.1 (7177..8711)

NW_018388410.1Genomic Context describing neighboring genes Neighboring gene cytochrome c oxidase subunit 6B1 Neighboring gene uncharacterized LOC110254492 Neighboring gene uncharacterized LOC110254494 Neighboring gene signal recognition particle subunit SRP68

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018388410 Unplaced Scaffold Reference Aiptasia genome 1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA nuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in RNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: uncharacterized protein LOC110254495

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001417965.1-RS_2023_11

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Aiptasia genome 1.1

Genomic

  1. NW_018388410.1 Reference Aiptasia genome 1.1

    Range
    7177..8711
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021061502.2 → XP_020917161.1  LOW QUALITY PROTEIN: uncharacterized protein LOC110254495

    UniProtKB/TrEMBL
    A0A913YBG5
    Related
    XP_020917161.1, XM_021061502.2
    Conserved Domains (2) summary
    cd00204
    Location:93 → 230
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:136 → 170
    ANK; ANK repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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