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btg1 B-cell translocation gene 1, anti-proliferative [ Danio rerio (zebrafish) ]

Gene ID: 114432, updated on 2-Nov-2024

Summary

Official Symbol
btg1provided by ZNC
Official Full Name
B-cell translocation gene 1, anti-proliferativeprovided by ZNC
Primary source
ZFIN:ZDB-GENE-010726-1
See related
Ensembl:ENSDARG00000027249 AllianceGenome:ZFIN:ZDB-GENE-010726-1
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
btg-a; sb:cb1010; zgc:65815; wu:fb14h05; wu:fb40c11; wu:fk92d10
Summary
Predicted to be involved in negative regulation of cell population proliferation. Predicted to be active in cytoplasm and nucleus. Is expressed in several structures, including cardiovascular system; ectoderm; mesoderm; nervous system; and neural tube. Orthologous to human BTG1 (BTG anti-proliferation factor 1). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
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Genomic context

See btg1 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 4 NC_007115.7 (16538306..16545048, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 4 NC_007115.6 (16549330..16556072, complement)

Chromosome 4 - NC_007115.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103910437 Neighboring gene wu:fc23c09 Neighboring gene caprin family member 2 Neighboring gene SIN3-HDAC complex associated factor

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by ZFIN

Process Evidence Code Pubs
involved_in negative regulation of cell population proliferation IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_200020.1NP_956314.1  protein BTG1

    See identical proteins and their annotated locations for NP_956314.1

    Status: PROVISIONAL

    Source sequence(s)
    BC056691
    UniProtKB/TrEMBL
    A0A8M1PCB0, Q6PH73
    Related
    ENSDARP00000031665.4, ENSDART00000033188.5
    Conserved Domains (1) summary
    pfam07742
    Location:10123
    BTG; BTG family

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007115.7 Reference GRCz11 Primary Assembly

    Range
    16538306..16545048 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)