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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001289445.1 → NP_001276374.1 probable phospholipid-transporting ATPase IIA isoform 2
See identical proteins and their annotated locations for NP_001276374.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) contains an alternate 5' terminal exon and initiates translation at an alternate start codon, compared to variant 1. It encodes isoform 2, which has a shorter and distinct N-terminus, compared to isoform 1.
- Source sequence(s)
-
AK082271, AL844575, AL929248, BC094551, BE989200, BY123191
- Consensus CDS
-
CCDS71202.1
- UniProtKB/TrEMBL
- Q505G9, Q8C288
- Related
- ENSMUSP00000104804.3, ENSMUST00000109175.9
- Conserved Domains (2) summary
-
- cd07541
Location:39 → 951
- P-type_ATPase_APLT_Neo1-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Neo1p and human putative APLT, ATP9B
- cl26237
Location:449 → 557
- Cation_ATPase; Cation transport ATPase (P-type)
-
NM_001289446.1 → NP_001276375.1 probable phospholipid-transporting ATPase IIA isoform 3
See identical proteins and their annotated locations for NP_001276375.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) contains an alternate 5' terminal exon and initiates translation at an alternate start codon, compared to variant 1. It encodes isoform 3, which has a shorter and distinct N-terminus, compared to isoform 1.
- Source sequence(s)
-
AK082271, AL844575, BE989200, BY240030, BY293759
- Consensus CDS
-
CCDS71203.1
- UniProtKB/TrEMBL
- Q505G9, Q8C4G3
- Related
- ENSMUSP00000104806.2, ENSMUST00000109177.8
- Conserved Domains (2) summary
-
- cd07541
Location:37 → 949
- P-type_ATPase_APLT_Neo1-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Neo1p and human putative APLT, ATP9B
- cl26237
Location:447 → 555
- Cation_ATPase; Cation transport ATPase (P-type)
-
NM_001354977.2 → NP_001341906.1 probable phospholipid-transporting ATPase IIA isoform 4
Status: VALIDATED
- Source sequence(s)
-
AL844575, AL929248
- UniProtKB/TrEMBL
-
Q505G9
- Conserved Domains (2) summary
-
- cd07541
Location:33 → 945
- P-type_ATPase_APLT_Neo1-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Neo1p and human putative APLT, ATP9B
- pfam13246
Location:443 → 551
- Cation_ATPase; Cation transport ATPase (P-type)
-
NM_001354978.1 → NP_001341907.1 probable phospholipid-transporting ATPase IIA isoform 5
Status: VALIDATED
- Source sequence(s)
-
AL844575, AL929248
- UniProtKB/TrEMBL
-
Q505G9
- Conserved Domains (2) summary
-
- cd07541
Location:1 → 871
- P-type_ATPase_APLT_Neo1-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Neo1p and human putative APLT, ATP9B
- pfam13246
Location:369 → 477
- Cation_ATPase; Cation transport ATPase (P-type)
-
NM_015731.3 → NP_056546.2 probable phospholipid-transporting ATPase IIA isoform 1
See identical proteins and their annotated locations for NP_056546.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (1).
- Source sequence(s)
-
AL844575, AL929248
- Consensus CDS
-
CCDS38345.1
- UniProtKB/Swiss-Prot
- O70228, Q8VDI5, Q922L9
- UniProtKB/TrEMBL
-
Q505G9
- Related
- ENSMUSP00000029060.5, ENSMUST00000029060.11
- Conserved Domains (6) summary
-
- cd01427
Location:652 → 802
- HAD_like; Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, ...
- TIGR01652
Location:53 → 1045
- ATPase-Plipid; phospholipid-translocating P-type ATPase, flippase
- pfam00122
Location:109 → 337
- E1-E2_ATPase; E1-E2 ATPase
- pfam13246
Location:499 → 573
- Cation_ATPase; Cation transport ATPase (P-type)
- pfam16209
Location:40 → 104
- PhoLip_ATPase_N; Phospholipid-translocating ATPase N-terminal
- pfam16212
Location:811 → 1039
- PhoLip_ATPase_C; Phospholipid-translocating P-type ATPase C-terminal
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000068.8 Reference GRCm39 C57BL/6J
- Range
-
168476358..168584290 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_017315066.1 → XP_017170555.1 probable phospholipid-transporting ATPase IIA isoform X2
- UniProtKB/TrEMBL
-
Q505G9
- Conserved Domains (2) summary
-
- cd07541
Location:1 → 871
- P-type_ATPase_APLT_Neo1-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Neo1p and human putative APLT, ATP9B
- pfam13246
Location:369 → 477
- Cation_ATPase; Cation transport ATPase (P-type)
-
XM_030246882.1 → XP_030102742.1 probable phospholipid-transporting ATPase IIA isoform X2
- UniProtKB/TrEMBL
-
Q505G9
- Conserved Domains (2) summary
-
- cd07541
Location:1 → 871
- P-type_ATPase_APLT_Neo1-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Neo1p and human putative APLT, ATP9B
- pfam13246
Location:369 → 477
- Cation_ATPase; Cation transport ATPase (P-type)
-
XM_006498603.1 → XP_006498666.1 probable phospholipid-transporting ATPase IIA isoform X1
- UniProtKB/TrEMBL
-
Q505G9
- Conserved Domains (2) summary
-
- cd07541
Location:34 → 946
- P-type_ATPase_APLT_Neo1-like; Aminophospholipid translocases (APLTs), similar to Saccharomyces cerevisiae Neo1p and human putative APLT, ATP9B
- pfam13246
Location:444 → 552
- Cation_ATPase; Cation transport ATPase (P-type)
-
XM_017315067.1 → XP_017170556.1 probable phospholipid-transporting ATPase IIA isoform X3
- Conserved Domains (2) summary
-
- pfam13246
Location:14 → 122
- Cation_ATPase; Cation transport ATPase (P-type)
- cl21460
Location:73 → 516
- HAD_like; Haloacid Dehalogenase-like Hydrolases