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lido-9 Alcohol dehydrogenase transcription factor myb/sant-like protein [ Caenorhabditis elegans ]

Gene ID: 173646, updated on 2-Nov-2024

Summary

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Official Symbol
lido-9
Official Full Name
Alcohol dehydrogenase transcription factor myb/sant-like protein
Primary source
WormBase:WBGene00016576
Locus tag
CELE_C41H7.6
See related
AllianceGenome:WB:WBGene00016576
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See lido-9 in Genome Data Viewer
Location:
chromosome: II
Exon count:
3
Sequence:
Chromosome: II; NC_003280.10 (3000768..3002411)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene LIn-8 Domain containing Neighboring gene LIn-8 Domain containing Neighboring gene LIn-8 Domain containing

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. SIN-3 acts in distinct complexes to regulate the germline transcriptional program in Caenorhabditis elegans. Robert VJ, et al. Development, 2023 Nov 1. PMID 37818613, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
Alcohol dehydrogenase transcription factor myb/sant-like protein
NP_494420.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    3000768..3002411
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_062019.8 → NP_494420.1  Alcohol dehydrogenase transcription factor myb/sant-like protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_494420.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    O17149
    Conserved Domains (1) summary
    pfam03353
    Location:27 → 306
    Lin-8; Ras-mediated vulval-induction antagonizt
Nucleotide Protein
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