capg-2 CAP-G condensin subunit [Caenorhabditis elegans] - Gene

Summary

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Official Symbol: capg-2
Official Full Name: CAP-G condensin subunit
Primary source: WormBase:WBGene00010093
Locus tag: CELE_F55C5.4
See related: AllianceGenome:WB:WBGene00010093
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Caenorhabditis elegans (strain: Bristol N2)
Lineage: Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary: Involved in mitotic sister chromatid segregation. Predicted to be part of condensin complex. Predicted to be active in nucleus. Orthologous to human NCAPG2 (non-SMC condensin II complex subunit G2). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See capg-2 in Genome Data Viewer

Location:: chromosome: V

Exon count:: 6

Sequence:: Chromosome: V; NC_003283.11 (12271873..12275658)

Chromosome V - NC_003283.11 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

A global chromatin compaction pathway that represses germline gene expression during starvation.
Title: A global chromatin compaction pathway that represses germline gene expression during starvation.

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Markers

F55C5.4 (e-PCR)
- UniSTS:311823

F55C5.5 (e-PCR)
- UniSTS:307706

Homology

Orthologs from OrthoDB

Gene Ontology Provided by WormBase

Function	Evidence Code	Pubs
enables protein binding	IPI Inferred from Physical Interaction more info	PubMed

Process	Evidence Code	Pubs
involved_in mitotic sister chromatid segregation	IBA Inferred from Biological aspect of Ancestor more info
involved_in mitotic sister chromatid segregation	IMP Inferred from Mutant Phenotype more info	PubMed

Component	Evidence Code	Pubs
part_of condensin complex	IBA Inferred from Biological aspect of Ancestor more info
is_active_in nucleus	IBA Inferred from Biological aspect of Ancestor more info
located_in nucleus	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: CAP-G condensin subunit

NP_506080.1

Product from WormBase gene class capg;
Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003283.11 Reference assembly

Range

12271873..12275658

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_073679.6 → NP_506080.1 CAP-G condensin subunit [Caenorhabditis elegans]

See identical proteins and their annotated locations for NP_506080.1

Status: REVIEWED

UniProtKB/TrEMBL

Q20818

Conserved Domains (2) summary

pfam12422
Location:57 → 209

Condensin2nSMC; Condensin II non structural maintenance of chromosomes subunit

sd00044
Location:178 → 207

HEAT; HEAT repeat [structural motif]