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Psg-ps1 pregnancy specific beta-1-glycoprotein, pseudogene 1 [ Mus musculus (house mouse) ]

Gene ID: 232919, updated on 17-Aug-2024

Summary

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Official Symbol
Psg-ps1provided by MGI
Official Full Name
pregnancy specific beta-1-glycoprotein, pseudogene 1provided by MGI
Primary source
MGI:MGI:1347253
See related
Ensembl:ENSMUSG00000121341 AllianceGenome:MGI:1347253
Gene type
pseudo
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Cea6; Cea-6
Expression
Restricted expression toward placenta adult (RPKM 49.9) See more
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Genomic context

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See Psg-ps1 in Genome Data Viewer
Location:
7 A2; 7 9.15 cM
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (17406238..17415985)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (17672313..17682060)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene predicted gene 9519 Neighboring gene predicted gene, 45973 Neighboring gene CEA cell adhesion molecule 5 Neighboring gene STARR-seq mESC enhancer starr_18156 Neighboring gene peptidylprolyl isomerase A pseudogene 7_184.1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Characterization of murine carcinoembryonic antigen gene family members. Rudert F, et al. Mamm Genome, 1992. PMID 1638085
  2. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  3. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
  4. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
  5. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Other Names

  • carcinoembryonic antigen 6
  • pregnancy specific glycoprotein, pseudogene 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_002857.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    AK132281
    Related
    ENSMUST00000206181.2

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    17406238..17415985
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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