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sfc2 transcription factor TFIIIA [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2542887, updated on 18-Sep-2024

Summary

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Official Symbol
sfc2
Official Full Name
transcription factor TFIIIA
Primary source
PomBase:SPAC144.09c
Locus tag
SPOM_SPAC144.09C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See sfc2 in Genome Data Viewer
Location:
chromosome: I
Exon count:
2
Sequence:
Chromosome: I; NC_003424.3 (4669627..4671248, complement)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene AP-3 adaptor complex subunit Apl5 Neighboring gene GTPase Gpn2 Neighboring gene DNAJ domain-containing protein Jac1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene pig-W

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Functional analysis of the novel C-terminal domains of S pombe transcription factor IIIA. Schulman DB, et al. J Mol Biol, 2003 Aug 8. PMID 12888341
  2. Identification and characterization of transcription factor IIIA from Schizosaccharomyces pombe. Schulman DB, et al. Nucleic Acids Res, 2002 Jul 1. PMID 12087160, Free PMC Article
  3. Isolation and cloning of four subunits of a fission yeast TFIIIC complex that includes an ortholog of the human regulatory protein TFIIICbeta. Huang Y, et al. J Biol Chem, 2000 Oct 6. PMID 10906331
  4. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  5. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables 5S rRNA binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables DNA binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables RNA polymerase III general transcription initiation factor activity IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in transcription initiation at RNA polymerase III promoter IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
is_active_in cytosol HDA PubMed 
is_active_in nucleus HDA PubMed 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
transcription factor TFIIIA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    4669627..4671248 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001020099.3 → NP_594670.1  transcription factor TFIIIA [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_594670.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9UTL5
    Conserved Domains (2) summary
    COG5048
    Location:1 → 374
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:28 → 47
    ZF_C2H2; C2H2 Zn finger [structural motif]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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