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sss1 translocon gamma subunit Sss1 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2543140, updated on 18-Sep-2024

Summary

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Official Symbol
sss1
Official Full Name
translocon gamma subunit Sss1
Primary source
PomBase:SPAC4G8.02c
Locus tag
SPOM_SPAC4G8.02C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See sss1 in Genome Data Viewer
Location:
chromosome: I
Exon count:
3
Sequence:
Chromosome: I; NC_003424.3 (756479..757109, complement)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene fip1-like pre-mRNA polyadenylation factor Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene protein cum1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene pumilio family RNA-binding protein Puf5

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  2. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables protein transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in SRP-dependent cotranslational protein targeting to membrane, translocation ISO
Inferred from Sequence Orthology
more info
  
involved_in post-translational protein targeting to membrane, translocation IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in protein insertion into ER membrane IC
Inferred by Curator
more info
  
Component Evidence Code Pubs
part_of Sec61 translocon complex ISO
Inferred from Sequence Orthology
more info
  
part_of Ssh1 translocon complex IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in endoplasmic reticulum HDA PubMed 

General protein information

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Preferred Names
translocon gamma subunit Sss1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    756479..757109 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001018459.3 → NP_593061.1  translocon gamma subunit Sss1 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_593061.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q09827
    Conserved Domains (1) summary
    COG2443
    Location:3 → 66
    Sss1; Preprotein translocase subunit Sss1 [Intracellular trafficking, secretion, and vesicular transport]
Nucleotide Protein
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