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RHTO_08153 WD repeat protein [ Rhodotorula toruloides NP11 ]

Gene ID: 27372166, updated on 3-Jan-2024

Summary

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Gene symbol
RHTO_08153
Gene description
WD repeat protein
Locus tag
RHTO_08153
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rhodotorula toruloides NP11 (strain: NP11)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina; Microbotryomycetes; Sporidiobolales; Sporidiobolaceae; Rhodotorula
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Genomic context

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See RHTO_08153 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
6

NW_015622969.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein s29 Neighboring gene meiosis protein Mei2 Neighboring gene allantoicase Neighboring gene ribonuclease III

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015622969.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A multi-omic map of the lipid-producing yeast Rhodosporidium toruloides. Zhu Z, et al. Nat Commun, 2012. PMID 23047670, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
WD repeat protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_015622969.1 Reference assembly

    Range
    571422..574040 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016421807.1 → XP_016273919.1  WD repeat protein [Rhodotorula toruloides NP11]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A061BDN4, M7WY86
    Conserved Domains (4) summary
    COG2319
    Location:125 → 303
    WD40; WD40 repeat [General function prediction only]
    pfam10313
    Location:337 → 380
    DUF2415; uncharacterized protein domain (DUF2415)
    sd00039
    Location:232 → 270
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:231 → 351
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
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