gatd3l glutamine amidotransferase class 1 domain containing 3, like [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: gatd3lprovided by ZNC
Official Full Name: glutamine amidotransferase class 1 domain containing 3, likeprovided by ZNC
Primary source: ZFIN:ZDB-GENE-980526-188
See related: Ensembl:ENSDARG00000094516 AllianceGenome:ZFIN:ZDB-GENE-980526-188
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: es1; esi; gatd3a; fk61d03; gatd3al; C21orf22; wu:fk61d03
Summary: Acts upstream of or within mitochondrion morphogenesis. Located in mitochondrion. Is expressed in eye and retinal cone cell. Orthologous to human GATD3 (glutamine amidotransferase class 1 domain containing 3). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: all
NEW: Try the new Gene table
Try the new Transcript table

Genomic context

Location:: chromosome: 8

Exon count:: 7

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	8	NC_007119.7 (4838180..4850816)
105	previous assembly	GRCz10 (GCF_000002035.5)	8	NC_007119.6 (4781925..4794539)

Chromosome 8 - NC_007119.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help

See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

Go to the top of the page Help

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

ES1 is the mitochondrial protein that is first found to promote enlargement of individual mitochondria.
Title: ES1 is a mitochondrial enlarging factor contributing to form mega-mitochondria in zebrafish cones.

Submit: New GeneRIF Correction

General gene information

Go to the top of the page Help

Markers

U10403 (e-PCR)
- UniSTS:205639

U10403 (e-PCR)
- UniSTS:186954

fk61d03.x1 (e-PCR)
- UniSTS:201302

fb79b06 (e-PCR)
- UniSTS:204720

Gene Ontology Provided by ZFIN

Process	Evidence Code	Pubs
acts_upstream_of_or_within mitochondrion organization	IMP Inferred from Mutant Phenotype more info	PubMed

Component	Evidence Code	Pubs
is_active_in mitochondrion	IBA Inferred from Biological aspect of Ancestor more info
located_in mitochondrion	IDA Inferred from Direct Assay more info	PubMed
located_in mitochondrion	IEA Inferred from Electronic Annotation more info

General protein information

Go to the top of the page Help

Preferred Names: ES1 protein, mitochondrial

Names: glutamine amidotransferase class 1 domain containing 3A, like; glutamine amidotransferase-like class 1 domain-containing protein 3A, mitochondrial

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.