frmd6 FERM domain containing 6 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: frmd6provided by ZNC
Official Full Name: FERM domain containing 6provided by ZNC
Primary source: ZFIN:ZDB-GENE-050522-354
See related: Ensembl:ENSDARG00000002332 AllianceGenome:ZFIN:ZDB-GENE-050522-354
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: wu:fb38g08; zgc:110114
Summary: Predicted to be involved in actomyosin structure organization. Predicted to be active in cytoskeleton. Orthologous to human FRMD6 (FERM domain containing 6). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 13

Exon count:: 14

Annotation release	Status	Assembly	Chr	Location
106	current	GRCz11 (GCF_000002035.6)	13	NC_007124.7 (36958086..36995448)
105	previous assembly	GRCz10 (GCF_000002035.5)	13	NC_007124.6 (36832196..36869558)

Chromosome 13 - NC_007124.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Process	Evidence Code	Pubs
involved_in positive regulation of hippo signaling	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
is_active_in cytoplasmic side of apical plasma membrane	IBA Inferred from Biological aspect of Ancestor more info
located_in cytoskeleton	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: FERM domain-containing protein 6

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001020816.1 → NP_001018652.1 FERM domain-containing protein 6

See identical proteins and their annotated locations for NP_001018652.1

Status: PROVISIONAL

Source sequence(s)

BC095176

UniProtKB/TrEMBL

Q503U6

Related

ENSDARP00000024425.8, ENSDART00000024386.11

Conserved Domains (4) summary

smart00295
Location:20 → 215

B41; Band 4.1 homologues

cd13185
Location:219 → 327

FERM_C_FRMD1_FRMD6; FERM domain C-lobe of FERM domain containing 1 and 6 proteins

pfam00373
Location:115 → 226

FERM_M; FERM central domain

pfam09379
Location:20 → 82

FERM_N; FERM N-terminal domain