bloc1s5 biogenesis of lysosomal organelles complex-1, subunit 5, muted [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: bloc1s5provided by ZNC
Official Full Name: biogenesis of lysosomal organelles complex-1, subunit 5, mutedprovided by ZNC
Primary source: ZFIN:ZDB-GENE-030131-3502
See related: Ensembl:ENSDARG00000111747 AllianceGenome:ZFIN:ZDB-GENE-030131-3502
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: fc43a05; wu:fc43a05; zgc:113385
Summary: Predicted to be located in transport vesicle. Predicted to be part of BLOC-1 complex. Human ortholog(s) of this gene implicated in Hermansky-Pudlak syndrome. Orthologous to human BLOC1S5 (biogenesis of lysosomal organelles complex 1 subunit 5). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 24

Exon count:: 5

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	24	NC_007135.7 (7991749..7995772, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	24	NC_007135.6 (7962430..7963272, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	Unplaced Scaffold	NW_008805405.1 (399..2768, complement)

Chromosome 24 - NC_007135.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

A novel BLOC1S5-related HPS-11 patient and zebrafish with bloc1s5 disruption.
Title: A novel BLOC1S5-related HPS-11 patient and zebrafish with bloc1s5 disruption.

Submit: New GeneRIF Correction

General gene information

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Gene Ontology Provided by ZFIN

Component	Evidence Code	Pubs
part_of BLOC-1 complex	IBA Inferred from Biological aspect of Ancestor more info
part_of BLOC-1 complex	IEA Inferred from Electronic Annotation more info
located_in transport vesicle	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: biogenesis of lysosome-related organelles complex 1 subunit 5

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.