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zmynd19 zinc finger, MYND-type containing 19 [ Danio rerio (zebrafish) ]

Gene ID: 325735, updated on 2-Nov-2024

Summary

Official Symbol
zmynd19provided by ZNC
Official Full Name
zinc finger, MYND-type containing 19provided by ZNC
Primary source
ZFIN:ZDB-GENE-030131-4460
See related
Ensembl:ENSDARG00000100773 AllianceGenome:ZFIN:ZDB-GENE-030131-4460
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
MIZIP; fd07e10; wu:fd07e10
Summary
Predicted to enable metal ion binding activity. Predicted to be active in cytoplasm; membrane; and synapse. Orthologous to human ZMYND19 (zinc finger MYND-type containing 19). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
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Genomic context

See zmynd19 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 5 NC_007116.7 (54337284..54395397, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 5 NC_007116.6 (53690691..53748804, complement)

Chromosome 5 - NC_007116.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103911123 Neighboring gene transmembrane protein 141 Neighboring gene B-box and SPRY domain containing Neighboring gene coenzyme Q4 homolog (S. cerevisiae) Neighboring gene Tnf receptor-associated factor 2b

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Markers

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in synapse IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
zinc finger MYND domain-containing protein 19
Names
zinc finger, MYND domain containing 19

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_183069.1NP_898892.1  zinc finger MYND domain-containing protein 19

    See identical proteins and their annotated locations for NP_898892.1

    Status: PROVISIONAL

    Source sequence(s)
    BC045296
    UniProtKB/TrEMBL
    Q7ZW43
    Related
    ENSDARP00000141166.1, ENSDART00000160781.2
    Conserved Domains (2) summary
    pfam01753
    Location:174212
    zf-MYND; MYND finger
    pfam13392
    Location:66105
    HNH_3; HNH endonuclease

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007116.7 Reference GRCz11 Primary Assembly

    Range
    54337284..54395397 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)