U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

cby1 chibby 1, beta catenin antagonist [ Danio rerio (zebrafish) ]

Gene ID: 326875, updated on 27-Mar-2024

Summary

Official Symbol
cby1provided by ZNC
Official Full Name
chibby 1, beta catenin antagonistprovided by ZNC
Primary source
ZFIN:ZDB-GENE-030131-5074
See related
Ensembl:ENSDARG00000077409 AllianceGenome:ZFIN:ZDB-GENE-030131-5074
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
LRP; fe37g01; wu:fe37g01
Summary
Orthologous to human CBY1 (chibby family member 1, beta catenin antagonist). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See cby1 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
5
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 12 NC_007123.7 (19188588..19190159)
105 previous assembly GRCz10 (GCF_000002035.5) 12 NC_007123.6 (19066714..19068285)

Chromosome 12 - NC_007123.7Genomic Context describing neighboring genes Neighboring gene TEF transcription factor, PAR bZIP family member a Neighboring gene zinc finger CCCH-type containing 7Bb Neighboring gene solute carrier family 16 member 8 Neighboring gene pdgfa associated protein 1a

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General protein information

Preferred Names
protein chibby homolog 1
Names
chibby homolog 1
leucine-rich protein

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001003838.1NP_001003838.1  protein chibby homolog 1

    See identical proteins and their annotated locations for NP_001003838.1

    Status: PROVISIONAL

    Source sequence(s)
    AF393213
    UniProtKB/TrEMBL
    Q8JI29
    Related
    ENSDARP00000121412.1, ENSDART00000148011.3
    Conserved Domains (1) summary
    pfam14645
    Location:1112
    Chibby; Chibby family

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007123.7 Reference GRCz11 Primary Assembly

    Range
    19188588..19190159
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCz11 ALT_DRER_TU_2

Genomic

  1. NW_018395301.1 Reference GRCz11 ALT_DRER_TU_2

    Range
    424944..426514
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)