U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

zgc:66472 zgc:66472 [ Danio rerio (zebrafish) ]

Gene ID: 327494, updated on 12-Sep-2024

Summary

Official Symbol
zgc:66472provided by ZNC
Official Full Name
zgc:66472provided by ZNC
Primary source
ZFIN:ZDB-GENE-030131-5705
See related
Ensembl:ENSDARG00000075916 AllianceGenome:ZFIN:ZDB-GENE-030131-5705
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
fi14c03; wu:fi14c03
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See zgc:66472 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 1 NC_007112.7 (43988713..44001011, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 1 NC_007112.6 (43287549..43299847, complement)

Chromosome 1 - NC_007112.7Genomic Context describing neighboring genes Neighboring gene si:dkey-22i16.9 Neighboring gene secretory calcium-binding phosphoprotein 9 Neighboring gene uncharacterized LOC103909073 Neighboring gene si:ch73-109d9.1

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General protein information

Preferred Names
uncharacterized protein LOC327494

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_199812.2NP_956106.2  uncharacterized protein LOC327494

    See identical proteins and their annotated locations for NP_956106.2

    Status: VALIDATED

    Source sequence(s)
    CR385050
    UniProtKB/TrEMBL
    A0A8M1PA73, B8JHZ5
    Related
    ENSDARP00000122243.1, ENSDART00000138447.3
    Conserved Domains (1) summary
    sd00017
    Location:263282
    ZF_C2H2; C2H2 Zn finger [structural motif]

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007112.7 Reference GRCz11 Primary Assembly

    Range
    43988713..44001011 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005160062.5XP_005160119.1  uncharacterized protein LOC327494 isoform X1

    See identical proteins and their annotated locations for XP_005160119.1

    UniProtKB/TrEMBL
    A0A8M1PA73, B8JHZ5
    Conserved Domains (1) summary
    sd00017
    Location:263282
    ZF_C2H2; C2H2 Zn finger [structural motif]