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mtfr1l mitochondrial fission regulator 1-like [ Danio rerio (zebrafish) ]

Gene ID: 334296, updated on 28-Oct-2024

Summary

Official Symbol
mtfr1lprovided by ZNC
Official Full Name
mitochondrial fission regulator 1-likeprovided by ZNC
Primary source
ZFIN:ZDB-GENE-030131-6228
See related
Ensembl:ENSDARG00000003940 AllianceGenome:ZFIN:ZDB-GENE-030131-6228
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
fam54b; fi39f11; zgc:63922; wu:fi39f11
Summary
Predicted to be involved in aerobic respiration and mitochondrial fission. Predicted to be located in mitochondrial outer membrane. Predicted to be active in mitochondrion. Orthologous to human MTFR1L (mitochondrial fission regulator 1 like). [provided by Alliance of Genome Resources, Oct 2024]
Orthologs
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Genomic context

See mtfr1l in Genome Data Viewer
Location:
chromosome: 17
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 17 NC_007128.7 (24718226..24727255)
105 previous assembly GRCz10 (GCF_000002035.5) 17 NC_007128.6 (24699786..24708854)

Chromosome 17 - NC_007128.7Genomic Context describing neighboring genes Neighboring gene si:ch211-15d5.11 Neighboring gene selenoprotein N Neighboring gene transcription factor Adf-1 Neighboring gene SH3 and cysteine rich domain Neighboring gene granulysin

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Markers

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in aerobic respiration IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in mitochondrial fission IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in mitochondrial outer membrane IEA
Inferred from Electronic Annotation
more info
 
is_active_in mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
mitochondrial fission regulator 1-like
Names
family with sequence similarity 54, member B
protein FAM54B

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_199884.1NP_956178.1  mitochondrial fission regulator 1-like

    See identical proteins and their annotated locations for NP_956178.1

    Status: PROVISIONAL

    Source sequence(s)
    BC053148
    UniProtKB/Swiss-Prot
    Q7T3E8
    Related
    ENSDARP00000018738.7, ENSDART00000007271.8
    Conserved Domains (1) summary
    pfam05308
    Location:10269
    Mito_fiss_reg; Mitochondrial fission regulator

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007128.7 Reference GRCz11 Primary Assembly

    Range
    24718226..24727255
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005158494.5XP_005158551.1  mitochondrial fission regulator 1-like isoform X1

    See identical proteins and their annotated locations for XP_005158551.1

    UniProtKB/Swiss-Prot
    Q7T3E8
    Conserved Domains (1) summary
    pfam05308
    Location:10269
    Mito_fiss_reg; Mitochondrial fission regulator

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018394990.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    280282..287757
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)