wdr13 WD repeat domain 13 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: wdr13provided by ZNC
Official Full Name: WD repeat domain 13provided by ZNC
Primary source: ZFIN:ZDB-GENE-050522-274
See related: Ensembl:ENSDARG00000022974 AllianceGenome:ZFIN:ZDB-GENE-050522-274
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: wu:fa04f02; zgc:112032
Summary: Predicted to enable promoter-specific chromatin binding activity. Predicted to be active in nucleus. Orthologous to human WDR13 (WD repeat domain 13). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: human mouse all
NEW: Try the new Gene table
Try the new Transcript table

Genomic context

Location:: chromosome: 8

Exon count:: 10

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	8	NC_007119.7 (6920838..6943171, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	8	NC_007119.6 (6877290..6899623, complement)

Chromosome 8 - NC_007119.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help

See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

Go to the top of the page Help

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

Go to the top of the page Help

Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info
enables promoter-specific chromatin binding	IBA Inferred from Biological aspect of Ancestor more info

Process	Evidence Code	Pubs
involved_in biological_process	ND No biological Data available more info

Component	Evidence Code	Pubs
is_active_in nucleus	IBA Inferred from Biological aspect of Ancestor more info

General protein information

Go to the top of the page Help

Preferred Names: WD repeat-containing protein 13

Names: WD repeat domain 13 protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001023573.1 → NP_001018867.1 WD repeat-containing protein 13

See identical proteins and their annotated locations for NP_001018867.1

Status: PROVISIONAL

Source sequence(s)

BC095650

UniProtKB/TrEMBL

Q502L6

Related

ENSDARP00000031340.6, ENSDART00000033294.8

Conserved Domains (3) summary

COG2319
Location:162 → 482

WD40; WD40 repeat [General function prediction only]

sd00039
Location:173 → 212

7WD40; WD40 repeat [structural motif]

cl02567
Location:209 → 478

WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...