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plin3 perilipin 3 [ Danio rerio (zebrafish) ]

Gene ID: 335278, updated on 21-Sep-2024

Summary

Official Symbol
plin3provided by ZNC
Official Full Name
perilipin 3provided by ZNC
Primary source
ZFIN:ZDB-GENE-030131-7218
See related
Ensembl:ENSDARG00000013711 AllianceGenome:ZFIN:ZDB-GENE-030131-7218
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
fl05f04; wu:fl05f04; si:rp71-61h23.4
Summary
Orthologous to several human genes including PLIN3 (perilipin 3). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

See plin3 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 8 NC_007119.7 (19270861..19280852, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 8 NC_007119.6 (19240461..19250461, complement)

Chromosome 8 - NC_007119.7Genomic Context describing neighboring genes Neighboring gene abhydrolase domain containing 17A, depalmitoylase b Neighboring gene zgc:77486 Neighboring gene ral guanine nucleotide dissociation stimulator-like 1 Neighboring gene macrophage expressed 1, tandem duplicate 2

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General protein information

Preferred Names
mannose-6-phosphate receptor binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001386314.1NP_001373243.1  mannose-6-phosphate receptor binding protein 1

    Status: VALIDATED

    Source sequence(s)
    FP067410
    UniProtKB/TrEMBL
    A0A8M9QE31, F1QGJ3
    Related
    ENSDARP00000091246.4, ENSDART00000100473.5
    Conserved Domains (1) summary
    pfam03036
    Location:14411
    Perilipin; Perilipin family

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007119.7 Reference GRCz11 Primary Assembly

    Range
    19270861..19280852 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018394718.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    405064..415055 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)