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ccdc157 coiled-coil domain containing 157 [ Danio rerio (zebrafish) ]

Gene ID: 368731, updated on 2-Nov-2024

Summary

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Official Symbol
ccdc157provided by ZNC
Official Full Name
coiled-coil domain containing 157provided by ZNC
Primary source
ZFIN:ZDB-GENE-030616-155
See related
Ensembl:ENSDARG00000056279 AllianceGenome:ZFIN:ZDB-GENE-030616-155
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
si:dz150f13.1; si:busm1-150f13.1; si:ch211-242m24.6
Summary
Orthologous to human CCDC157 (coiled-coil domain containing 157). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
human mouse all
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Genomic context

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See ccdc157 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 8 NC_007119.7 (36543255..36554682, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 8 NC_007119.6 (36510575..36522293, complement)

Chromosome 8 - NC_007119.7Genomic Context describing neighboring genes Neighboring gene solute carrier family 7 member 4 Neighboring gene uncharacterized LOC137496284 Neighboring gene splicing factor 3a, subunit 1 Neighboring gene polymerase (DNA directed), delta 2, regulatory subunit

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
coiled-coil domain-containing protein 157

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007119.7 Reference GRCz11 Primary Assembly

    Range
    36543255..36554682 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002663174.7 → XP_002663220.3  coiled-coil domain-containing protein 157

    UniProtKB/TrEMBL
    A0A8M1RR56, F1QTW5
    Related
    ENSDARP00000073207.4, ENSDART00000078746.6
    Conserved Domains (1) summary
    pfam17082
    Location:399 → 521
    Spc29; Spindle Pole Component 29
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials