laptm4b lysosomal protein transmembrane 4 beta [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: laptm4bprovided by ZNC
Official Full Name: lysosomal protein transmembrane 4 betaprovided by ZNC
Primary source: ZFIN:ZDB-GENE-030616-616
See related: Ensembl:ENSDARG00000035870 AllianceGenome:ZFIN:ZDB-GENE-030616-616
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: fd60g10; zgc:73120; wu:fd60g10; si:zc215i13.7
Summary: Predicted to be located in cell projection; multivesicular body membrane; and plasma membrane. Predicted to be integral component of membrane. Predicted to be active in lysosomal membrane. Is expressed in epiphysis; otic placode; otic vesicle; and retina. Orthologous to human LAPTM4B (lysosomal protein transmembrane 4 beta). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 19

Exon count:: 7

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	19	NC_007130.7 (32864577..32888758, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	19	NC_007130.6 (33277457..33301638, complement)

Chromosome 19 - NC_007130.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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Markers

fi75d07.x1 (e-PCR)
- UniSTS:197981

fd60g10.x1 (e-PCR)
- UniSTS:195811

Gene Ontology Provided by ZFIN

Component	Evidence Code	Pubs
located_in cell projection	IEA Inferred from Electronic Annotation more info
located_in endosome	IEA Inferred from Electronic Annotation more info
is_active_in lysosomal membrane	IBA Inferred from Biological aspect of Ancestor more info
located_in lysosome	IEA Inferred from Electronic Annotation more info
located_in membrane	IEA Inferred from Electronic Annotation more info
located_in multivesicular body membrane	IEA Inferred from Electronic Annotation more info
located_in plasma membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: lysosomal-associated transmembrane protein 4B

Names: lysosomal associated protein transmembrane 4 beta

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.