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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001328340.1 → NP_001315269.1 tight junction protein ZO-3
Status: VALIDATED
- Source sequence(s)
-
CU695074, CU856138
- UniProtKB/TrEMBL
- A0A8M2BHQ8, F1R3X0
- Related
- ENSDARP00000025259.10, ENSDART00000012336.10
- Conserved Domains (6) summary
-
- COG0265
Location:652 → 704
- DegQ; Periplasmic serine protease, S1-C subfamily, contain C-terminal PDZ domain [Posttranslational modification, protein turnover, chaperones]
- cd00992
Location:10 → 95
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- pfam00595
Location:632 → 700
- PDZ; PDZ domain (Also known as DHR or GLGF)
- pfam05750
Location:444 → 565
- Rubella_Capsid; Rubella capsid protein
- cl17036
Location:725 → 789
- SH3; Src Homology 3 domain superfamily
- cl17190
Location:831 → 1005
- NK; Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates ...
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCz11 Primary Assembly
Genomic
-
NC_007133.7 Reference GRCz11 Primary Assembly
- Range
-
17657601..17688868 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_005170442.5 → XP_005170499.1 tight junction protein ZO-3 isoform X1
See identical proteins and their annotated locations for XP_005170499.1
- UniProtKB/TrEMBL
- A0A8M2BHQ8, F1R3X0
- Conserved Domains (6) summary
-
- COG0265
Location:652 → 704
- DegQ; Periplasmic serine protease, S1-C subfamily, contain C-terminal PDZ domain [Posttranslational modification, protein turnover, chaperones]
- cd00992
Location:10 → 95
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- pfam00595
Location:632 → 700
- PDZ; PDZ domain (Also known as DHR or GLGF)
- pfam05750
Location:444 → 565
- Rubella_Capsid; Rubella capsid protein
- cl17036
Location:725 → 789
- SH3; Src Homology 3 domain superfamily
- cl17190
Location:831 → 1005
- NK; Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates ...
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_201494.1: Suppressed sequence
- Description
- NM_201494.1: This RefSeq was removed because currently there is insufficient support for the transcript and the protein.