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zgc:64106 zgc:64106 [ Danio rerio (zebrafish) ]

Gene ID: 393348, updated on 28-Oct-2024

Summary

Official Symbol
zgc:64106provided by ZNC
Official Full Name
zgc:64106provided by ZNC
Primary source
ZFIN:ZDB-GENE-040426-1370
See related
Ensembl:ENSDARG00000011371 AllianceGenome:ZFIN:ZDB-GENE-040426-1370
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Summary
Predicted to enable oxidoreductase activity. Is expressed in endoderm; gut; intestinal bulb; intestinal bulb primordium; and peripheral olfactory organ. [provided by Alliance of Genome Resources, Oct 2024]
Orthologs
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Genomic context

See zgc:64106 in Genome Data Viewer
Location:
chromosome: 21
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 21 NC_007132.7 (11984805..11996463, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 21 NC_007132.6 (11892177..11903810, complement)

Chromosome 21 - NC_007132.7Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORD57 Neighboring gene NOP56 ribonucleoprotein homolog Neighboring gene motilin-like Neighboring gene aquaporin 7 Neighboring gene tubulin polyglutamylase complex subunit 2

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General protein information

Preferred Names
uncharacterized protein LOC393348

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_200377.2NP_956671.2  uncharacterized protein LOC393348

    Status: VALIDATED

    Source sequence(s)
    CT027620
    Related
    ENSDARP00000115544.1, ENSDART00000143537.2

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007132.7 Reference GRCz11 Primary Assembly

    Range
    11984805..11996463 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)