coro6 coronin 6 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: coro6provided by ZNC
Official Full Name: coronin 6provided by ZNC
Primary source: ZFIN:ZDB-GENE-040426-1202
See related: Ensembl:ENSDARG00000102272 AllianceGenome:ZFIN:ZDB-GENE-040426-1202
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: zgc:63634
Summary: Predicted to enable actin filament binding activity. Predicted to be involved in actin filament organization and cell migration. Orthologous to human CORO6 (coronin 6). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 21

Exon count:: 13

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	21	NC_007132.7 (40483764..40529184)
105	previous assembly	GRCz10 (GCF_000002035.5)	21	NC_007132.6 (40460070..40506137)

Chromosome 21 - NC_007132.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables actin filament binding	IBA Inferred from Biological aspect of Ancestor more info

Process	Evidence Code	Pubs
involved_in actin filament organization	IBA Inferred from Biological aspect of Ancestor more info
involved_in cell migration	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: coronin-6

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_200396.1 → NP_956690.1 coronin-6

See identical proteins and their annotated locations for NP_956690.1

Status: PROVISIONAL

Source sequence(s)

BC054129

UniProtKB/TrEMBL

A0A8M1PH46, Q7SZ58

Related

ENSDARP00000130643.1, ENSDART00000161919.2

Conserved Domains (4) summary

pfam08953
Location:7 → 64

DUF1899; Domain of unknown function (DUF1899)

pfam16300
Location:343 → 385

WD40_4; Type of WD40 repeat

sd00039
Location:37 → 79

7WD40; WD40 repeat [structural motif]

cl02567
Location:78 → 295

WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...