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c8g complement component 8, gamma polypeptide [ Danio rerio (zebrafish) ]

Gene ID: 393837, updated on 2-Nov-2024

Summary

Official Symbol
c8gprovided by ZNC
Official Full Name
complement component 8, gamma polypeptideprovided by ZNC
Primary source
ZFIN:ZDB-GENE-040426-1898
See related
Ensembl:ENSDARG00000032098 AllianceGenome:ZFIN:ZDB-GENE-040426-1898
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
zgc:77874
Summary
Predicted to act upstream of or within complement activation. Predicted to be located in extracellular region. Predicted to be part of membrane attack complex. Is expressed in liver. Orthologous to human C8G (complement C8 gamma chain). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
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Genomic context

See c8g in Genome Data Viewer
Location:
chromosome: 24
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 24 NC_007135.7 (17031129..17039617, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 24 NC_007135.6 (16886710..16895198, complement)

Chromosome 24 - NC_007135.7Genomic Context describing neighboring genes Neighboring gene prostaglandin D2 synthase b, tandem duplicate 2 Neighboring gene prostaglandin D2 synthase b, tandem duplicate 1 Neighboring gene methionine sulfoxide reductase B2 Neighboring gene armadillo repeat containing 3

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General protein information

Preferred Names
complement component C8 gamma chain

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_200863.1NP_957157.1  complement component C8 gamma chain precursor

    See identical proteins and their annotated locations for NP_957157.1

    Status: PROVISIONAL

    Source sequence(s)
    BC062865
    UniProtKB/TrEMBL
    A0A8M1PFX2, Q6P5J2
    Related
    ENSDARP00000048822.6, ENSDART00000048823.8
    Conserved Domains (1) summary
    pfam00061
    Location:59194
    Lipocalin; Lipocalin / cytosolic fatty-acid binding protein family

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007135.7 Reference GRCz11 Primary Assembly

    Range
    17031129..17039617 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)