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OTC ornithine carbamoyltransferase [ Gallus gallus (chicken) ]

Gene ID: 395735, updated on 5-Mar-2024

Summary

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Symbol
OTCprovided by CGNC
Full Name
ornithine carbamoyltransferaseprovided by CGNC
Primary source
CGNC:12150
See related
Ensembl:ENSGALG00010002770
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
11
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (113000298..113026157, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (113054197..113080328, complement)

Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101751659 Neighboring gene tetraspanin 7 Neighboring gene uncharacterized LOC121109447 Neighboring gene retinitis pigmentosa GTPase regulator Neighboring gene sushi repeat containing protein X

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Chicken ornithine transcarbamylase gene, structure, regulation, and chromosomal assignment: repetitive sequence motif in intron 3 regulates this enzyme activity. Shimogiri T, et al. J Biochem, 1998 Nov. PMID 9792920
  2. Comparison of renal ornithine transcarbamylase activities within different chicken breeds. Tsuji S, et al. Biochem Genet, 1981 Oct. PMID 7332529
  3. Induction of ornithine transcarbamylase activity with egg yolk in chick kidney. Tsuji S, et al. Poult Sci, 1983 Mar. PMID 6682551
  4. Genetic control of ornithine transcarbamylase induction in chick kidney. Tsuji S, et al. Biochem Genet, 1983 Oct. PMID 6661175
  5. Genetically controlled quantitative variation of ornithine transcarbamylase in the chick kidney. Tsuji S, et al. Biochem Genet, 1983 Oct. PMID 6419722

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables amino acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ornithine carbamoyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in arginine biosynthetic process via ornithine IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in citrulline biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ornithine transcarbamylase, mitochondrial
Names
OTCase
ornithine carbamoyltransferase, mitochondrial
NP_990241.2
XP_040509393.1
XP_046762658.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_204910.2 → NP_990241.2  ornithine transcarbamylase, mitochondrial precursor

    Status: PROVISIONAL

    Source sequence(s)
    JAENSK010000021
    UniProtKB/TrEMBL
    A0A8V0XEC2
    Related
    ENSGALP00010003971.1, ENSGALT00010006425.1
    Conserved Domains (1) summary
    PRK00779
    Location:37 → 342
    PRK00779; ornithine carbamoyltransferase; Provisional

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    113000298..113026157 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040653459.1 → XP_040509393.1  ornithine transcarbamylase, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A8V0XEC2
    Conserved Domains (1) summary
    PRK00779
    Location:37 → 342
    PRK00779; ornithine carbamoyltransferase; Provisional

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    113054197..113080328 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046906702.1 → XP_046762658.1  ornithine transcarbamylase, mitochondrial isoform X1

    UniProtKB/Swiss-Prot
    Q9YHY9
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9YHY9.1 GenPept UniProtKB/Swiss-Prot:Q9YHY9

Gene LinkOut

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