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gadd45ga growth arrest and DNA-damage-inducible, gamma a [ Danio rerio (zebrafish) ]

Gene ID: 402991, updated on 2-Nov-2024

Summary

Official Symbol
gadd45gaprovided by ZNC
Official Full Name
growth arrest and DNA-damage-inducible, gamma aprovided by ZNC
Primary source
ZFIN:ZDB-GENE-040426-1882
See related
Ensembl:ENSDARG00000019417 AllianceGenome:ZFIN:ZDB-GENE-040426-1882
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
gadd45g; zgc:77806
Summary
Predicted to be involved in regulation of cell cycle. Predicted to be active in cytoplasm and nucleus. Is expressed in several structures, including anterior axial hypoblast; endocrine system; mesoderm; nervous system; and pectoral fin. Orthologous to human GADD45G (growth arrest and DNA damage inducible gamma). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
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Genomic context

See gadd45ga in Genome Data Viewer
Location:
chromosome: 8
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 8 NC_007119.7 (31367667..31369144, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 8 NC_007119.6 (31358435..31359912, complement)

Chromosome 8 - NC_007119.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100331417 Neighboring gene un-named hu7912 Neighboring gene cAMP responsive element binding protein 3-like 3 like Neighboring gene NIM1 serine/threonine protein kinase a

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Clone Names

  • MGC77806

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in regulation of cell cycle IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within regulation of cell cycle IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
growth arrest and DNA-damage-inducible, gamma a
Names
gadd45gamma
growth arrest and DNA damage 45 gamma

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_205691.1NP_991254.1  growth arrest and DNA-damage-inducible, gamma a

    See identical proteins and their annotated locations for NP_991254.1

    Status: PROVISIONAL

    Source sequence(s)
    BC065870
    UniProtKB/TrEMBL
    A0A2R8QMX3, F6P317, Q6P021
    Related
    ENSDARP00000023235.4, ENSDART00000019937.6
    Conserved Domains (1) summary
    pfam01248
    Location:24126
    Ribosomal_L7Ae; Ribosomal protein L7Ae/L30e/S12e/Gadd45 family

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007119.7 Reference GRCz11 Primary Assembly

    Range
    31367667..31369144 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018394733.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    124420..125897 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)