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fnbp4 formin binding protein 4 [ Danio rerio (zebrafish) ]

Gene ID: 403074, updated on 2-Nov-2024

Summary

Official Symbol
fnbp4provided by ZNC
Official Full Name
formin binding protein 4provided by ZNC
Primary source
ZFIN:ZDB-GENE-130530-633
See related
Ensembl:ENSDARG00000051800 AllianceGenome:ZFIN:ZDB-GENE-130530-633
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Summary
Orthologous to human FNBP4 (formin binding protein 4). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
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Genomic context

See fnbp4 in Genome Data Viewer
Location:
chromosome: 25
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 25 NC_007136.7 (28640459..28668776, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 25 NC_007136.6 (28197257..28225574, complement)

Chromosome 25 - NC_007136.7Genomic Context describing neighboring genes Neighboring gene PKc_like domain-containing protein Neighboring gene transmembrane protein 17 Neighboring gene AGBL carboxypeptidase 2 Neighboring gene leucine rich repeat containing 10 Neighboring gene CCR4-NOT transcription complex, subunit 2

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General protein information

Preferred Names
formin-binding protein 4
Names
zmp:0000000630

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001305621.1NP_001292550.1  formin-binding protein 4

    Status: VALIDATED

    Source sequence(s)
    CR376836
    UniProtKB/TrEMBL
    A0A8M1P1W3, F1QGN0
    Related
    ENSDARP00000111839.1, ENSDART00000126490.3
    Conserved Domains (2) summary
    cd00201
    Location:521552
    WW; Two conserved tryptophans domain; also known as the WWP or rsp5 domain; around 40 amino acids; functions as an interaction module in a diverse set of signalling proteins; binds specific proline-rich sequences but at low affinities compared to other ...
    pfam00397
    Location:168195
    WW; WW domain

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007136.7 Reference GRCz11 Primary Assembly

    Range
    28640459..28668776 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)