mrpl38 mitochondrial ribosomal protein L38 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: mrpl38provided by ZNC
Official Full Name: mitochondrial ribosomal protein L38provided by ZNC
Primary source: ZFIN:ZDB-GENE-040426-2373
See related: Ensembl:ENSDARG00000039667 AllianceGenome:ZFIN:ZDB-GENE-040426-2373
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: zgc:85834
Summary: Predicted to be located in ribosome. Predicted to be part of mitochondrial large ribosomal subunit. Orthologous to human MRPL38 (mitochondrial ribosomal protein L38). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 12

Exon count:: 9

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	12	NC_007123.7 (45238292..45257212)
105	previous assembly	GRCz10 (GCF_000002035.5)	12	NC_007123.6 (44867468..44886420)

Chromosome 12 - NC_007123.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Component	Evidence Code	Pubs
part_of ribonucleoprotein complex	IEA Inferred from Electronic Annotation more info
located_in ribosome	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: large ribosomal subunit protein mL38

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_212945.1 → NP_998110.1 large ribosomal subunit protein mL38

See identical proteins and their annotated locations for NP_998110.1

Status: PROVISIONAL

Source sequence(s)

BC067649

UniProtKB/TrEMBL

Q6NWB9

Related

ENSDARP00000057982.3, ENSDART00000057983.5

Conserved Domains (1) summary

cd00866
Location:138 → 286

PEBP_euk; PhosphatidylEthanolamine-Binding Protein (PEBP) domain present in eukaryotes