golga5 golgin A5 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: golga5provided by ZNC
Official Full Name: golgin A5provided by ZNC
Primary source: ZFIN:ZDB-GENE-040426-2749
See related: Ensembl:ENSDARG00000039279 AllianceGenome:ZFIN:ZDB-GENE-040426-2749
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: sb:cb898; zgc:66400; im:7153094; wu:fd50h11
Summary: Predicted to enable protein homodimerization activity. Predicted to be involved in Golgi organization and retrograde transport, vesicle recycling within Golgi. Predicted to be located in Golgi apparatus. Predicted to be active in Golgi cisterna and Golgi membrane. Is expressed in axis; hatching gland; notochord; and polster. Orthologous to human GOLGA5 (golgin A5). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 13

Exon count:: 13

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	13	NC_007124.7 (33211382..33227260, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	13	NC_007124.6 (33080932..33096810, complement)

Chromosome 13 - NC_007124.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables protein homodimerization activity	ISS Inferred from Sequence or Structural Similarity more info

Process	Evidence Code	Pubs
involved_in Golgi organization	IBA Inferred from Biological aspect of Ancestor more info
acts_upstream_of_or_within Golgi organization	IEA Inferred from Electronic Annotation more info
involved_in Golgi organization	ISS Inferred from Sequence or Structural Similarity more info
involved_in Golgi vesicle transport	ISS Inferred from Sequence or Structural Similarity more info
involved_in retrograde transport, vesicle recycling within Golgi	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
located_in Golgi apparatus	IEA Inferred from Electronic Annotation more info
located_in Golgi apparatus	ISS Inferred from Sequence or Structural Similarity more info
is_active_in Golgi cisterna	IBA Inferred from Biological aspect of Ancestor more info
is_active_in Golgi membrane	IBA Inferred from Biological aspect of Ancestor more info
located_in membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: golgin subfamily A member 5

Names: golgi autoantigen, golgin subfamily a, 5; golgin-84

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_213411.2 → NP_998576.1 golgin subfamily A member 5

See identical proteins and their annotated locations for NP_998576.1

Status: PROVISIONAL

Source sequence(s)

BC055639

UniProtKB/Swiss-Prot

Q7SXE4

Related

ENSDARP00000057385.3, ENSDART00000057386.4

Conserved Domains (2) summary

pfam09787
Location:266 → 740

Golgin_A5; Golgin subfamily A member 5

cl19219
Location:468 → 593

DUF342; Protein of unknown function (DUF342)