decr1 2,4-dienoyl CoA reductase 1, mitochondrial [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: decr1provided by ZNC
Official Full Name: 2,4-dienoyl CoA reductase 1, mitochondrialprovided by ZNC
Primary source: ZFIN:ZDB-GENE-040718-142
See related: Ensembl:ENSDARG00000003869 AllianceGenome:ZFIN:ZDB-GENE-040718-142
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: fe38b07; zgc:92356; wu:fe38b07
Summary: Predicted to enable 2,4-dienoyl-CoA reductase (NADPH) activity. Predicted to be involved in fatty acid beta-oxidation. Predicted to be active in mitochondrion. Orthologous to human DECR1 (2,4-dienoyl-CoA reductase 1). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 16

Exon count:: 10

Annotation release	Status	Assembly	Chr	Location
106	current	GRCz11 (GCF_000002035.6)	16	NC_007127.7 (36748561..36760156)
105	previous assembly	GRCz10 (GCF_000002035.5)	16	NC_007127.6 (36794677..36806272)

Chromosome 16 - NC_007127.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables 2,4-dienoyl-CoA reductase (NADPH) activity	IBA Inferred from Biological aspect of Ancestor more info
enables 2,4-dienoyl-CoA reductase (NADPH) activity	IEA Inferred from Electronic Annotation more info
enables oxidoreductase activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in fatty acid beta-oxidation	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
is_active_in mitochondrion	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: 2,4-dienoyl-CoA reductase, mitochondrial

NP_001002444.2

EC 1.3.1.34

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001002444.2 → NP_001002444.2 2,4-dienoyl-CoA reductase, mitochondrial

Status: VALIDATED

Source sequence(s)

EH504463, EH572714, EH595644

UniProtKB/TrEMBL

A0A8M1N0E2

Related

ENSDARP00000120922.1, ENSDART00000139069.2

Conserved Domains (2) summary

PRK07677
Location:57 → 302

PRK07677; short chain dehydrogenase; Provisional

cd05369
Location:55 → 301

TER_DECR_SDR_a; Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR