nxph1 neurexophilin 1 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: nxph1provided by ZNC
Official Full Name: neurexophilin 1provided by ZNC
Primary source: ZFIN:ZDB-GENE-040718-231
See related: Ensembl:ENSDARG00000033447 AllianceGenome:ZFIN:ZDB-GENE-040718-231
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: zgc:101108
Summary: Predicted to enable signaling receptor binding activity. Is expressed in brain and spinal cord. Orthologous to human NXPH1 (neurexophilin 1). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs: all
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Genomic context

Location:: chromosome: 19

Exon count:: 4

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	19	NC_007130.7 (37849195..37927492)
105	previous assembly	GRCz10 (GCF_000002035.5)	19	NC_007130.6 (38270820..38340371)

Chromosome 19 - NC_007130.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Zebrafish nxph1 is expressed dynamically in various clusters of post-mitotic neurons and in glia in the central nervous system.
Title: Dynamic expression of neurexophilin1 during zebrafish embryonic development.

Submit: New GeneRIF Correction

General gene information

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Markers

Z9050 (e-PCR)
- UniSTS:5740

z45980 (e-PCR), detects polymorphism
- UniSTS:238482

Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Process	Evidence Code	Pubs
involved_in biological_process	ND No biological Data available more info

General protein information

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Preferred Names: neurexophilin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.