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C8h11orf71 similar to human chromosome 11 open reading frame 71 [ Rattus norvegicus (Norway rat) ]

Gene ID: 500993, updated on 5-Mar-2024

Summary

Official Symbol
C8h11orf71provided by RGD
Official Full Name
similar to human chromosome 11 open reading frame 71provided by RGD
Primary source
RGD:1563941
See related
Ensembl:ENSRNOG00000005918 AllianceGenome:RGD:1563941
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
RGD1563941
Summary
Predicted to be located in nuclear body. Predicted to be active in nucleus. Orthologous to human C11orf71 (chromosome 11 open reading frame 71). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

See C8h11orf71 in Genome Data Viewer
Location:
8q23
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 8 NC_086026.1 (57735075..57735489)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 8 NC_051343.1 (48838556..48838970)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 8 NC_005107.4 (52829196..52829610)

Chromosome 8 - NC_086026.1Genomic Context describing neighboring genes Neighboring gene RNA exonuclease 2 Neighboring gene RNA binding motif protein 7 Neighboring gene uncharacterized LOC120094143 Neighboring gene nicotinamide N-methyltransferase Neighboring gene zinc finger and BTB domain containing 16 Neighboring gene uncharacterized LOC120094144

Genomic regions, transcripts, and products

General protein information

Preferred Names
uncharacterized protein C11orf71 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001109293.1NP_001102763.1  uncharacterized protein C11orf71 homolog

    See identical proteins and their annotated locations for NP_001102763.1

    Status: PROVISIONAL

    Source sequence(s)
    CH473975
    UniProtKB/TrEMBL
    B0BNK2, F7FLM3
    Related
    ENSRNOP00000007754.3, ENSRNOT00000007754.6
    Conserved Domains (1) summary
    pfam15747
    Location:1106
    DUF4687; Domain of unknown function (DUF4687)

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086026.1 Reference GRCr8

    Range
    57735075..57735489
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)