zgc:113516 zgc:113516 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: zgc:113516provided by ZNC
Official Full Name: zgc:113516provided by ZNC
Primary source: ZFIN:ZDB-GENE-050320-154
See related: AllianceGenome:ZFIN:ZDB-GENE-050320-154
Gene type: protein coding
RefSeq status: PREDICTED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: im:6894162; zgc:158549
Summary: Is expressed in liver. [provided by Alliance of Genome Resources, Apr 2022]
Annotation information: Annotation category: partial on reference assembly
Orthologs: all
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Genomic context

Location:: chromosome: 22

Exon count:: 3

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	22	NC_007133.7 (39124658..39125382, complement)
RS_2024_08	current	GRCz11 (GCF_000002035.6)	Unplaced Scaffold	NW_018394360.1 (3678..4678, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	22	NC_007133.6 (39182762..39198207, complement)

Chromosome 22 - NC_007133.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables ethanolamine kinase activity	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
is_active_in cellular_component	ND No biological Data available more info

General protein information

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Preferred Names: uncharacterized protein LOC541449

NP_001013592.1

EC 2.7.1.82

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001013574.2 → NP_001013592.1 uncharacterized protein LOC541449

See identical proteins and their annotated locations for NP_001013592.1

Status: PREDICTED

Source sequence(s)

BC090461

UniProtKB/TrEMBL

Q5BLF5

Conserved Domains (2) summary

PLN02236
Location:27 → 362

PLN02236; choline kinase

cd05157
Location:49 → 356

ETNK_euk; Euykaryotic Ethanolamine kinase