si:ch211-244b2.4 si:ch211-244b2.4 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: si:ch211-244b2.4provided by ZNC
Official Full Name: si:ch211-244b2.4provided by ZNC
Primary source: ZFIN:ZDB-GENE-030131-8699
See related: Ensembl:ENSDARG00000045530 AllianceGenome:ZFIN:ZDB-GENE-030131-8699
Gene type: protein coding
RefSeq status: PREDICTED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: fa94g12; wu:fa94g12; zgc:113454
Summary: Predicted to enable NAD+-protein poly-ADP-ribosyltransferase activity. Predicted to be active in nucleus. Orthologous to human ZC3HAV1 (zinc finger CCCH-type containing, antiviral 1). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs: all
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Genomic context

See si:ch211-244b2.4 in Genome Data Viewer

Location:: chromosome: 4

Exon count:: 10

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	4	NC_007115.7 (26096381..26108053, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	4	NC_007115.6 (26107183..26118855, complement)

Chromosome 4 - NC_007115.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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Markers

fk79a06.x1 (e-PCR)
- UniSTS:201539

fa94g12 (e-PCR), detects polymorphism
- UniSTS:188886

Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables NAD+-protein ADP-ribosyltransferase activity	IBA Inferred from Biological aspect of Ancestor more info
enables NAD+-protein poly-ADP-ribosyltransferase activity	IBA Inferred from Biological aspect of Ancestor more info
enables metal ion binding	IEA Inferred from Electronic Annotation more info
enables molecular_function	ND No biological Data available more info

Process	Evidence Code	Pubs
involved_in biological_process	ND No biological Data available more info

Component	Evidence Code	Pubs
is_active_in cellular_component	ND No biological Data available more info
is_active_in nucleus	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: uncharacterized protein LOC541512

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.