U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

praf2 PRA1 domain family, member 2 [ Danio rerio (zebrafish) ]

Gene ID: 550393, updated on 28-Oct-2024

Summary

Official Symbol
praf2provided by ZNC
Official Full Name
PRA1 domain family, member 2provided by ZNC
Primary source
ZFIN:ZDB-GENE-050417-190
See related
Ensembl:ENSDARG00000032535 AllianceGenome:ZFIN:ZDB-GENE-050417-190
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
im:6893481; zgc:112438
Summary
Predicted to be active in membrane. Orthologous to human PRAF2 (PRA1 domain family member 2). [provided by Alliance of Genome Resources, Oct 2024]
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See praf2 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 8 NC_007119.7 (44893628..44904695, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 8 NC_007119.6 (44899722..44910789, complement)

Chromosome 8 - NC_007119.7Genomic Context describing neighboring genes Neighboring gene calcium channel, voltage-dependent, L type, alpha 1F subunit a Neighboring gene uncharacterized LOC103911563 Neighboring gene zgc:154046 Neighboring gene translocase of inner mitochondrial membrane 17 homolog B (yeast)

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001017698.1NP_001017698.1  PRA1 family protein 2

    See identical proteins and their annotated locations for NP_001017698.1

    Status: PROVISIONAL

    Source sequence(s)
    BC093309
    UniProtKB/TrEMBL
    Q561T5
    Related
    ENSDARP00000040803.4, ENSDART00000040804.5
    Conserved Domains (1) summary
    pfam03208
    Location:5149
    PRA1; PRA1 family protein

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007119.7 Reference GRCz11 Primary Assembly

    Range
    44893628..44904695 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)