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tex9 testis expressed 9 [ Danio rerio (zebrafish) ]

Gene ID: 553441, updated on 28-Oct-2024

Summary

Official Symbol
tex9provided by ZNC
Official Full Name
testis expressed 9provided by ZNC
Primary source
ZFIN:ZDB-GENE-110623-3
See related
Ensembl:ENSDARG00000010586 AllianceGenome:ZFIN:ZDB-GENE-110623-3
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Summary
Orthologous to human TEX9 (testis expressed 9). [provided by Alliance of Genome Resources, Oct 2024]
Orthologs
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Genomic context

See tex9 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 7 NC_007118.7 (34496087..34506090, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 7 NC_007118.6 (34224610..34234613, complement)

Chromosome 7 - NC_007118.7Genomic Context describing neighboring genes Neighboring gene CLN6 transmembrane ER protein a Neighboring gene calmodulin-like 4a Neighboring gene regulatory factor X7a Neighboring gene formin homology 2 domain containing 1

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001327746.1NP_001314675.1  testis-expressed protein 9

    Status: VALIDATED

    Source sequence(s)
    CU075695, FO704631
    UniProtKB/TrEMBL
    A0A8M1P8Y3, F1QU49
    Related
    ENSDARP00000026137.8, ENSDART00000024869.10
    Conserved Domains (1) summary
    cl24005
    Location:277352
    DUF2570; Protein of unknown function (DUF2570)

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007118.7 Reference GRCz11 Primary Assembly

    Range
    34496087..34506090 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_068222295.1XP_068078396.1  testis-expressed protein 9 isoform X1