nudcd1 NudC domain containing 1 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: nudcd1provided by ZNC
Official Full Name: NudC domain containing 1provided by ZNC
Primary source: ZFIN:ZDB-GENE-050522-483
See related: Ensembl:ENSDARG00000036158 AllianceGenome:ZFIN:ZDB-GENE-050522-483
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: im:6901299; im:6912119; wu:fc11c02; zgc:110705
Summary: Predicted to be located in cytoplasm and nucleus. Orthologous to human NUDCD1 (NudC domain containing 1). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 19

Exon count:: 10

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	19	NC_007130.7 (22759116..22843445, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	19	NC_007130.6 (23174793..23259122, complement)

Chromosome 19 - NC_007130.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

fc11c02.x1 (e-PCR)
- UniSTS:192501

fc11c02.x1 (e-PCR)
- UniSTS:192502

Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Process	Evidence Code	Pubs
involved_in biological_process	ND No biological Data available more info

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info
located_in nucleus	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: nudC domain-containing protein 1

NP_001018463.1

EC 2.3.2.27

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001020627.2 → NP_001018463.1 nudC domain-containing protein 1

See identical proteins and their annotated locations for NP_001018463.1

Status: PROVISIONAL

Source sequence(s)

BC095378

UniProtKB/Swiss-Prot

Q503C8

Related

ENSDARP00000052502.4, ENSDART00000052503.5

Conserved Domains (1) summary

cl00175
Location:281 → 365

alpha-crystallin-Hsps_p23-like; alpha-crystallin domain (ACD) found in alpha-crystallin-type small heat shock proteins, and a similar domain found in p23 (a cochaperone for Hsp90) and in other p23-like proteins.